Mew heard the situation in which zygarde was passing and he responded positively so Mew with the help of Palkia they created a big comunity of aquatic pokemon (Phione) and they created one special to direct the others.
Manaphy was the prince of the sea and his task was protec the marines ecosystem with the pokemon that live there, the Phiones built a huge palace in the deep sea to they could live peacefully.
The technique of Manaphy to protect the ecosystem was give pause to those who tried to attack the sea (heart swap).
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Creation Of The Pokemon Universe
FantasySoon you will know how the pokemon universe was created through the next pages, leave that the legendary pokemons guide you and discover the secret of the universe. If you want look the images follow this account on instagram @legends_ofthe_world